Wednesday 29 August 2012

Picard release 1.76



---------- Forwarded message ----------
From: Alec Wysoker


Picard release 1.76
28 August 2012

- IntervalListTools.java: Added scatter (to support scatter-gather
parallelism) to IntervalList.

- ProgressLogger.java: Synchronized record() method to make class
thread-safe.

- Significant code refactoring in IlluminaBasecallsToSam; overhaulded
threading model to improve CPU utilization; added test for Tile comparator.

- Set SortingCollection.destructiveIteration true by default (as was the
original intent), in order to enable earlier GC of no-longer-needed
SAMRecords.


-Alec

------------------------------------------------------------------------------
Samtools-help mailing list

https://lists.sourceforge.net/lists/listinfo/samtools-help

No comments:

Post a Comment

Datanami, Woe be me