Monday, 7 May 2012

[Bowtie-bio-announce] Bowtie 0.12.8 released

From: Benjamin Langmead
Date: Mon, May 7, 2012 at 11:25 AM
Subject: [Bowtie-bio-announce] Bowtie 0.12.8 released
To: bowtie-bio-announce

Version 0.12.8 - May 6, 2012
  * Fixed a bug that would sometimes cause an immediate segmentation
    fault in --sam mode
  * Fixed script to not omit chromosome 25.
  * Removed -B option from usage message for bowtie-build; that option
    is not implemented
  * Fixed issue that could cause Bowtie not to compile when
    BOWTIE_PTHREADS is left undefined and pthreads.h is not present
  * Elaborated documentation for -B/--offbase option to indicate that
    it only affects offsets in the default output mode, not in SAM


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