what k-value do I use?
Source: velvet mailing list
It's aimed at beginners who want some guidance with choosing "k" and don't feel comfortable yet thinking in terms of k-mers rather than bases.
It hasn't been tested thoroughly, so will break if you give it silly input, but I think the basics work.
Hope you find it helpful!
--Dr Torsten Seemann
--Scientific Director : Victorian Bioinformatics Consortium, Monash University, AUSTRALIA_______________________________________________
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