Monday, 20 September 2010

Pysam - python module for read and manipulating sam files

Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. 

Looks promising! but failed at compile as I as missing a module on CentOS 5.4

python build
Traceback (most recent call last):
  File "", line 9, in ?
    import os, sys, glob, shutil, hashlib
ImportError: No module named hashlib

To be continued....

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Datanami, Woe be me