Wednesday 9 November 2016

Compiling BWA on Ubuntu 16.04.1 LTS

#install prereq else you will get utils.c:33:18: fatal error: zlib.h: No such file or directory
sudo apt-get install zlib1g-dev

#download the latest version and compile
$ wget http://downloads.sourceforge.net/project/bio-bwa/bwa-0.7.12.tar.bz2
$ tar jxvf bwa-0.7.12.tar.bz2
$ cd bwa-0.7.12/
$ make 

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Datanami, Woe be me