Version 1.2.0 - July 19, 2012
* Added support for Hadoop version 0.20.205.
* Dropped support for Hadoop versions prior to 0.20.
* Updated default Hadoop version for EMR jobs to 0.20.205.
* Updated Bowtie version used to 0.12.8.
* Updated R version used to 2.14.2.
* Updated jar files to use Ensembl v67 (used to be v61). In the
process, fixed an issue whereby $MYRNA_HOME/reftools scripts
would die due to unexpected new format of Ensembl database schema.
* Fixed issues with streaming jar version parsing
* Fixed documentation bugs regarding --sra-toolkit option, which is
superseded by the --fastq-dump option.
* Removed some diagnostic counters because Hadoop began to enforce
an upper limit on the number of counters allowed per job. For
instance, per-label summary statistics are no longer printed in
the Normalize step.
Thanks,
Ben
------------------------------------------------------------------------------
_______________________________________________
Bowtie-bio-announce mailing list
https://lists.sourceforge.net/lists/listinfo/bowtie-bio-announce
No comments:
Post a Comment