seems like using gzipped input files doesn't affect the analysis timings of snptest
will do this with binary geno (bgen) files and update
$ grep 'User' 6template-snptest.sh.log.gz.1 6template-snptest.sh.log
6template-snptest.sh.log.gz.1: User time (seconds): 669.87
6template-snptest.sh.log: User time (seconds): 662.10
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